Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMTRVMSVFGDVTSPVRGAFLVWSVVSG------------VFFVLALPAIYQSV-----------------VKTSRTLAILLASAIGLYGIGDCIFTGLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTG-----DK-TRSNIYLVLLIVSL-LSAGVYGLARIPAVNDLPVLDKIGFCQRISFFFNYLPIVVFGIDRIRKP---- |
| 1L8W Chain:A ((52-342)) | GGLVAEAFGFKSDPKKSDVKTYFTTVAAKLEKTKTDLNSLPTAVEGAIKEVSELLDKLVKAVKTAEGASSGTAAIGEVVADADAAKVADKASVKGIAKGIKEIVEAAGGSEKLKAVAAAKGENNKGAGKLFGKAGAAAHGDSEAASKAAGAVSAVSGEQILSAIVTAADAAEQDGKKPEEAKNPIAAAIGDKDGGAEFGQDEMKKDDQIAAAIALRGMAKDGKFAVKDGEKEKAEGAIKGAAESAVRKVLGAITGLIGDAVSSGLRKVGDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215364 for 1770 contacts (-121.7/contact) +
2D Compatibility (PS) -20703 + (NN) 7025 + (LL) 0
1D Compatibility (HY) 17200 + (ID) 900
Total energy: -212742.0 ( -120.19 by residue)
QMean score : 0.188
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