Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNP-KT-ATWDKIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKFYDSYLYGHGCHTIDQVLSYFG-KPDNIHYDVRQLLGEGRMNDYFDLDLYYG-VTKVSVKSSYFRIKARPSFVLYGKKGTFT-KETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK |
| 3M2T Chain:A ((5-331)) | LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQVDEFGETLHIQLNHYANKPR-APLWGLDSTLRSFLLAQAIHTIDLAITFGDGELRRVQSSVQR----HDDALIVRADMAFSSGATASLLAGTSFPYFEFDMKLVSSSSTLVELDNLWN--ITLHE---PEHATRPTGAAKRWRGAWQPG------PLDSGYERSGYHGELHQFFQAIREHRRFEADFASLLPTYRVIEEICSADA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115007 for 2706 contacts (-42.5/contact) +
2D Compatibility (PS) -34799 + (NN) -15387 + (LL) 1432
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -176961.0 ( -65.40 by residue)
QMean score : 0.469
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