Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIE-MIPQNDIQLSGEDLEKFERLIDALEDLEDVQKVYHNVELED |
2JSX Chain:A ((9-71)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------SLVVQAKSERISDISTQLNAF--PGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14498 for 416 contacts (-34.9/contact) +
2D Compatibility (PS) -6184 + (NN) -852 + (LL) 9804
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -15580.0 ( -37.45 by residue)
QMean score : 0.433
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