Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEPLVSVIIPVYNVEKYVKRCLDSVLEQTYHNLEVIVVNDGATDNSAKVIKSIS--DNRIRYFEKENGGQATARNFGLDVATGDYIVMVDSDDYISKNLVETCLDTVQKTNADLVLFTSYNVNQEGKMQYIK--RDK-GI-------K----------VLDAGPTPWNKFYQADLW-KG-SRFPVG--YWYEDLGIIPVVTLKAKNPVKIQDALYYYITDRADSQSNIQQVDHFLDVVIMLENVETELKKLGIYEESKDQLAYLYIEHLIYRLVLRKAIYITNKQERKKLIKKISTIIQEKFPNWGSYPYQAGGKLTATLKKKALWLYLHHLYLLGDLVWKYPFSIRSKQTGF |
| 3BCV Chain:A ((3-218)) | LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHKKNAGLGMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFT---------------FKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLP---------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -45506 for 1278 contacts (-35.6/contact) +
2D Compatibility (PS) -17932 + (NN) -4058 + (LL) 13488
1D Compatibility (HY) -9200 + (ID) 1650
Total energy: -64858.0 ( -50.75 by residue)
QMean score : 0.245
|
|
|