Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MKKMLVEFRDFALKGNVLDLAVAVVIGAAFGKIVSSLVD-NIIMPLVGVLLGGLDFTDLSFKVGKSVIQYGAFIQSIVDFIIIAFAIFIFVKVLTSFIKKKEQTVEETPVPP-TEEYLKEIRDLLKEQQK-----------
4K0D Chain:A ((5-147))
IAASADAQLELIGPRAAAAASLESAVLHVSLTARAYALTPEPARMDALQAALRRLEGAAARFAALPKSPEGAALSGRILAAVPPFEKAAVALGTAVATGGD---DSAIRAREATLPPMREELLSLLRTFGALQQAHDAGASHTILA
General information:
TITO was launched using:
RESULT:
Template:
4K0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57789 for 875 contacts (-66.0/contact) +
2D Compatibility (PS) -12867 + (NN) -1704 + (LL) 400
1D Compatibility (HY) 5600 + (ID) 1000
Total energy: -67360.0 ( -76.98 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_4K0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K0D-query.scw
PDB file :
Tito_Scwrl_4K0D.pdb
: