Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MNYEMISDYKDNKMYRDSFNRLAESTFDINFEEWYRDGFWNDKYIC-----YSYIDDNKVIANVSINKMNLIYQGEDYR-ALQIGTVMTHPDYRGQGLAKKLL-EHVIAKYEDQY-DFLYLFANDTVLDFYPKFGFER-VEESSFTVDACSLKRESSNLKKLNPGNKTDFQLISRIVSEKTPLSNI---LDVRESEDLLMF-------------YVLIALKNELYYIEELDVIVLMEQEDADLYVLDILSTKKLDVVEVLRYLPIKKI---ETIHLLFTPEK-SKYIDAAHIIE---------TEDMLFVR-PNILTNENYFLFPATSHA---------------------------------------------------------------- |
| 4MY3 Chain:B ((1-392)) | SNAVTDDLRLVDITETQLDDVLRVRARSFGLLAAGAREDWVRDAVEFVHDGRFLGVVSGDEVVAAARIWDFQQWWGGRRVPMA-GIAGVVVAPEYRGRG-VGSLLMRGVLERSRDKGMPISALYPATT--VIYRHLGYEFGGHRYRFSFQAADLRSLGGREVAVRRAGAKDAARFLELVGTAHEASRASGLLVWPESKIAEWLEDEENFAYLAEDGFVVYNWSDGDLQVDELVAHSEATARALWATVGSGASIARTVHAYLSPNDPVHLLVEHEADKQAHVQRWMLRLLDAPAAIAARGFAPGAAAEVDLLIDDPGVPAQSGRWHLSVADGTGELTPSDRSGDVLQLGSRGLAALYAGTPLAALRTAGLVTGGPVASDRLLDTAFGGAAPYMLDYF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83417 for 1980 contacts (-42.1/contact) +
2D Compatibility (PS) -30642 + (NN) 97 + (LL) 720
1D Compatibility (HY) -5600 + (ID) 2350
Total energy: -121192.0 ( -61.21 by residue)
QMean score : 0.263
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