Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLEQTIMSLIVFGGNAKSDAMLAIDSAKKG--DFAQADEQIAQAEQALLEAHHSQTKLIQGEARGEKTEVSLLLVHAQDHLMNAITFKDLAKEIVDLYKNK
1J7R Chain:A ((8-84))
------------LGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGD---------KKNIGPEEWLTLCSKWVRQ----
General information:
TITO was launched using:
RESULT:
Template:
1J7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7070 for 501 contacts (14.1/contact) +
2D Compatibility (PS) -7878 + (NN) -727 + (LL) 2872
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -963.0 ( -1.92 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1J7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J7R-query.scw
PDB file :
Tito_Scwrl_1J7R.pdb
: