Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKLIKLKKIVQIERKPFFITRQKLKLFRIVFNIIFVLMLFYYWSAIPLLLPRLIVVIFLLGSIFLTNKAFIAIKKRIGKTLFIRERLWYILESLKLYDSDGDRILNTAILTFDISNDNAVTISAPLFGDKWTKRLKNLEDNLVAGLGLPLLSKKELPNCVIYQLGHIEEIEQYVFNNNLTRKFFQSISSPVIKLSNTQQFSLKSNTNIGVYGRTGTGKTIALQWFLFNALAKGCGTDDSTYLGIVDGKGADLYALGKLLQEELGEQIAIGSSPQMLAKLSREFVDIMNARFEVIKQNSSLNADAYDLEMTPNFLFVDELASI--RDSCGSSKQGKELWNEILQNLGLIARKGRQAGCHLLLSTQDPNAENIPVELRNQISAVLYLGNPGADRLKMAFSMCELENVPTVSDRKGEALFHADGLNSIEPVLTIVPFVDVKTKQDFLQIVRNILPNY--------------------- |
| 1E32 Chain:A ((21-458)) | NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRG-----------DTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCP-------DVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKG---DIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVG--GCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA------------PAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMD---GLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQI-HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158683 for 3290 contacts (-48.2/contact) +
2D Compatibility (PS) -43454 + (NN) -1900 + (LL) 3324
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -210963.0 ( -64.12 by residue)
QMean score : 0.213
|
|
|