Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKPSIDTLLDKVPSKYSLVILQAKRAHELEAGEKATQDFKSVKSTLRALEEIESGNVVIHPDPSAKRASVRARIEAERLAKEE---EERKIKEQIAKEKEDGEKI
1HQM Chain:E ((1-98))
MAEPGIDKLFGMVDSKYRLTVVVAKRAQQLLRHRFKNTVLEPEERP-------KMRTLEGLYDDPNAVTWAMKELLTGRLFFGENLVPEDRLQKEMERLYPTEEE-
General information:
TITO was launched using:
RESULT:
Template:
1HQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 32646 for 561 contacts (58.2/contact) +
2D Compatibility (PS) -9666 + (NN) 289 + (LL) 1212
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 19431.0 ( 34.64 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_1HQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HQM-query.scw
PDB file :
Tito_Scwrl_1HQM.pdb
: