Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MTEQIKLSKSDRQKVWWRSQFLQGSWNYERM----QNMGWAYALI----------PALKKLYTTKEDRAAALERHMEFFNTHPYVAAPII----------GVTLALEEEKASGTPVEDKAIQGVKIGMMGPLAGIGDPV-----FWFTVRPILGALG----ASLASAGNILGPIIFFVGWNLIRMSFLWYTQELGYKSGKEITKDMSGGILQDITKGASILGMFILAVLVKRWVAINFTVDLPKKTLSEGAYINFPK---DHVSGQQLHDILGQVQSGLSLDKMQPQTLQGQLDS-LIPGLAGLLLTFFCMWLLKKKVSPITIIIGLFIVGILARLAGVM |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALL---KGKNHYALAIIKKKYSG--------VMRLIGELEVALWMKR------VNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPD--PKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109290 for 2114 contacts (-51.7/contact) +
2D Compatibility (PS) -29074 + (NN) -4778 + (LL) 2028
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -153964.0 ( -72.83 by residue)
QMean score : 0.204
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