Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MIRNEFYNQLINSEPIGFIDPFTDLGEFDSIQMKFKQPVRNLVNKYSGKPYNLSWQNKIEQMRVLY---IKYQKSLKLEDEEQEVHNRVKNKKSKKYVHEIVTTYLKLGFRFKEIEARVSLFNTRLRRNWKRSDYVTTDNPEFYLKKDLQNGYCSPNSFLPRSMKIN |
| 1VK5 Chain:A ((36-156)) | GSLLRRAEMYQDYMKQVPI-------------------------PTNRGSLIPFT-SWVGLSISMKQLYGQPLHYLTNVLLQRWDQSRFG--TDSEEQRLDSIIHPTKAEATIWLVEEIHRLTPSHLHMALLWR-------SDPMYHSFID---------PIFPE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25712 for 745 contacts (34.5/contact) +
2D Compatibility (PS) -12201 + (NN) -2032 + (LL) 2340
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: 9419.0 ( 12.64 by residue)
QMean score : 0.205
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