Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------------------------------------MKQAETLTSLEQVLKQIK-YSLDSYYSFCVKKGFVLKVIPVRENIEEVS--YLLNMIESQKDTEISTYYVDKLSKQLKEFVKKLNS--WEV-------KPLFTSEQLSKLTTYSTFLENKE
4D10 Chain:H ((14-212))
FSFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPEQQLARLTDYVAFLEN--
General information:
TITO was launched using:
RESULT:
Template:
4D10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10404 for 607 contacts (-17.1/contact) +
2D Compatibility (PS) -11048 + (NN) -1335 + (LL) 168
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -27719.0 ( -45.67 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_4D10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D10-query.scw
PDB file :
Tito_Scwrl_4D10.pdb
: