Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISNQELTLT-PLRGKSGKAYIGTYPNGERVFVKYNTTP--------ILPALAKEQ-IAPQLLWARRTSNGDMMSAQEWLDGRTLTKEDM-----GSKQIIHILLRLHKSRPLVNQ-LLQLGYK---IE-NPYDLLMDWEKQ----TPIQI--RENTYLQSIVTELKRSLPEFRTEVATIVHGDIKHSNWVITTSGLIYLVDWDSVRLTDRMYDVAYILSHYI----PQKHWKDWLSYYGYKDNEKVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIYELRKFRELIKKHNAS |
| 3W0O Chain:A ((24-297)) | --------DLMQLSEGEESRAFSFDVG-GRGYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEVMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDELMLWAED-CPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGDPLYEVANIFFWRPWLACMEQQARYFERRHPEL---AGSPRLRAYMLRIGLDQLYQSLVDGNFDDAAWAQGRCDAIVRSGAGT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93460 for 1782 contacts (-52.4/contact) +
2D Compatibility (PS) -25163 + (NN) -6737 + (LL) 1240
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -130520.0 ( -73.24 by residue)
QMean score : 0.400
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