Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSFKKLLLLFSIITILSIACTPHAKASGRSWKSWFIEQYFWLKRDKSYYKVQDESSFQKYLNASREQSDKGYYLDPNSVNGGLVQERLFDMQVYSWNDNGKANQKTIFYLAGGSYLNNPTPYHISMLKTLSTSLDAKIILPIYPKTPRYTYDYAIPRLVNLYRHFHEK------NANLTLMGDSAGGGLALGLAHALSHQSGQEAIPQPKNIILLSPWLDVTMKHPEIPKYEDTDPILSAWGLARVGEIWANGSNNTNHTYVSPKNA-PATKLAPITLFTGTREIFFPDIRDYAAQLQAANHPVNYIAQEGMNHVYPIYPI--EEAKTAQYQMIDIINKTP |
| 3WJ2 Chain:A ((61-308)) | ----------------------------------------------------------------------------------------DGRTLNARMYDDN--NAKSAILYYHGGGFLFGNIETYDNYCRFLAKESGVKIISIEYRLAPEHKFPDAFNDAYDSFHYIAKKKKDFGIEGRIGVAGDSAGANLAAALCLKCRD----GKTEMPAVQVLFYPSLAPDNFSRSFIEYS-DNYVLTGKMIRYFGNMYSKN----INPYFSPLVADDFSNLPPAIMVTNEYDPLRDPEETYVKKLREAGVRAVGIRGIGMIHGSATDFEVSDGARNIVKMVARIIPDYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142086 for 2058 contacts (-69.0/contact) +
2D Compatibility (PS) -25120 + (NN) -12881 + (LL) 5536
1D Compatibility (HY) -6000 + (ID) 2350
Total energy: -182901.0 ( -88.87 by residue)
QMean score : 0.571
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