Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQILEDYDGRALPKLETDRLILRQRTVGDVPAMFDYVCLEE--VAYPAGLSPIASLEDEYDYFENRYYQNLEKAKLPSGYGITVKGSDRIIGSCAFNHRR-EDDVFEIGYLLHPDYWGHGYMTEAVAALIEVGFTLLNLHKIEIRCYDYNKQSQRVAEKLGFTLEATIRDRKDNQGNRCVNLIYGLLRSEWE
2FCK Chain:A ((5-181))
---------TPDFQIVTQRLQLRLITADEAEELVQCIRQSQTLHQWVDW----FSQQEAEQFIQATRLNWV-KA-EAYGFGVFERQTQTLVGMVAINEFYHTFNMASLGYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSLIP----
General information:
TITO was launched using:
RESULT:
Template:
2FCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87311 for 1267 contacts (-68.9/contact) +
2D Compatibility (PS) -17819 + (NN) -1507 + (LL) 1296
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -114891.0 ( -90.68 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_2FCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCK-query.scw
PDB file :
Tito_Scwrl_2FCK.pdb
: