Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEMSFRWYGEDDPVTLENIGQIPTMKGIVTAIYDVPVGEVWSRERIQQLKEKVEAAGLKISVIESVPVH---EDIK-----LG---RPTRDLLIDNYIQTVKNLAAEGIDTICYNFMPVFDWTRTDLAYQYPDGSTALIFDETVSKKMDPVNGELSLPGWDASYSKEEMKAIMDAYAEIDEEKLWENLTYFIKRIIPEAEAVGVKMAIHPDDPPYSIFGLPRIITGLEAIERFVKLYDSKSNGITLCVGSYASDPQNDVLEISRRAFELDRVNFVHARNIKLGDG-----KSFKESAHPSEYGSIDMYEVIKLCHEFGFEGAIRPDHGRMIWGETGRPGYGLYDRALGATYLSGLYEAVIKGSK |
| 3TVA Chain:A ((21-289)) | ---------AGLGVHLEVAQDL-KVPTVQVHAPH---PHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGF----V----------------------------------P------------------E--SSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ------------ESADHLLEFIEDVNRPNLGINFDPANMILYGTGNPIEALRKVAR--YVRSIHCKDALWAPVNERGKSWGQEVALG--TGDVGMEAYLTTLWEIGYRGPLTIEREIPHD-----PVQQKKDLASALELLTGLRKKIANC-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103274 for 1979 contacts (-52.2/contact) +
2D Compatibility (PS) -27410 + (NN) -7458 + (LL) 5068
1D Compatibility (HY) -2400 + (ID) 2150
Total energy: -137624.0 ( -69.54 by residue)
QMean score : 0.489
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