Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKKNKIKKTLVDQILDKAKIE-HDSLQLDA-L----QGDLPNGIQKQDIFKTLALIGDKTGPIIGILPLTEHLSEKKLAKISGNKKVQMIPQKDLQKITGYIHGANNPIGIRQKHNYPIFIDTIALEKQELIVSAGEIGRSIRINSEVLADFVNAKFADIKE
2Z0X Chain:A ((4-157))
-----SPSARRVQGALETRGFGHLKVVELPASTRTAKEAAQAVGAEVGQIVKSLVFVGE-KGAYLFLVSGKNRLDLGKATRLVGG-PLRQATPEEVRELTGFAIGGVPPVGH--NTPLPAYLDEDLLGYPEVWAAGGTPRALFRATPKELLALTGAQVADLKE
General information:
TITO was launched using:
RESULT:
Template:
2Z0X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56283 for 1257 contacts (-44.8/contact) +
2D Compatibility (PS) -15773 + (NN) -2059 + (LL) 576
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -80239.0 ( -63.83 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_2Z0X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z0X-query.scw
PDB file :
Tito_Scwrl_2Z0X.pdb
: