Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVIL----PPNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDIN---IYEATKHAMIDAVSHLSVAP--EHLLID---------AMVLDLSIPQTK------IIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEGLQKY--GITPIHRKSFEPIKSML-------- |
| 1IO2 Chain:A ((1-213)) | ---------------------------------------------------------------------MKIAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDDYVILELPPDVIGSR-EGTLNEFEVENFAKALNSL--KVKPDVIYADAADVDEERFARELGERLNF--EAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYGEIGSGYPSDPRTRAFLENYYREHGEFPPIVRKGWKTLKKIAEKVESEKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94003 for 1441 contacts (-65.2/contact) +
2D Compatibility (PS) -19216 + (NN) -6764 + (LL) 7248
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -124185.0 ( -86.18 by residue)
QMean score : 0.429
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