Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIP---ESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGG--YYDS---TNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKK---GVPFVYANDRQDVEEVFQIKA--KETHSQTYRLH--NDFYIKE--EENYFNYIGPQ----ANIDHIQLQMPGHHQVSNASIAITTSLLLRDKYPKLTLQTIKDGLE-MTKWVGRTELIF----PNVMIDGAHNNESVDALVQVIKK-YQQKNVHILFAAINTK----PIESMLESLSSIA-PVSVTSFDYPKS-----INLDKYP----KAYTRVSDWKKWLH-DINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 3HN7 Chain:A ((103-492)) | --------------------------------------RHVIAVAGTHGKTTTTTMLAWILHYAGIDAGFLIG-G------------VPLVNTTDTNLQQVFAHS-SYL--------GTEKDD---------SD-NSV-NTGYFVIEADEYDSAFFDKRSKFVHYRPRTAILNNLEFD-------DLDAIQTQFHHMVRMIPSTGKIIMPAATISLEDTLAKGVWTPIWRTSVID--NSSDWQAELISADGSQ-FTVSFNDNKEATALVNWSMSGLHNVNNALVAIAAAYNI-----GVSVKTACAALSAFAGIKRRMELIGDVNDILVFDDFAHHPTAITTTLDGAKKKLADRRLWAIIEPRSNTMKMGIHQDSLAQSATLADHTLWYEPTGLEWGLKEVIDNATIANPSIGSQQVLSSVDDIIKHICTHAKAGDAIVIMSN----GGFEGIHQRLLTALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HN7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21911 for 2355 contacts (9.3/contact) +
2D Compatibility (PS) -32122 + (NN) 8507 + (LL) 7324
1D Compatibility (HY) 15200 + (ID) 950
Total energy: 19870.0 ( 8.44 by residue)
QMean score : 0.110
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