Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIDFRAEVDKRK-DALMDDLINLLRINSERDDSQADAEHPFGPGPVKALEFFLEMAERD---GYETKNV------DNYAGHFTFGQGEEELGIFGHLDVVPAGSGWDT--DPYEPVIKDNRLYARGSSDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHV--GLPKPDFGFSPDAEFPIINGEKGNITGYLHFSGENKGAVRLHSFSGGLRENMVPESATARFTSHLDQTTLGASLADFASKHNLKAELSVEDEQYTATVY--GKSAHGSTPQ-EGVNGATYLALYLSQFDFEGP----ARAFLDVTANII-----------H----EDFSG----EK---LGVAYEDDCMGPLSMNAGVFQFD----E--TN--DDNTIALNFRYPQGTDAKTIQTKLEKLNGVE-----KVTLSD-H-EHTPHYVPMDDE-LVSTLLAVYEKQTGLKGHEQVIGGGTF-GRLLER------GVAYGAMFPGDENTMHQANEYMPLENIFRSAAIYAEAIYELIK |
| 3PFE Chain:A ((5-470)) | -PQGLYDYICQQWQEEILPSLCDYIKIPNKSPHFDA--KWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPG-QIDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGL-PYPRCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSGAG----------------------------NYE-----QL-----------------------WMTTSLRGNL-----VGKLTVELINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPPYNAKVDFKIQNGGSKGWNAPLLSDWLAKAASEASMTYYDKPAAYMGEGGTIPFMSMLGEQFPKAQFMITGVLGPH--SNAHGPNEFLHLDMVKKLTSCVSYVLYSFSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75080 for 3286 contacts (-22.8/contact) +
2D Compatibility (PS) -43904 + (NN) -22751 + (LL) 3408
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: -152077.0 ( -46.28 by residue)
QMean score : 0.412
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