Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MYQRIRDLREDHDFTQRYVAEVLSFSHTN-YAKIERGEVVLTADVLIKLSKLYNVSTDYILGLTDYPHKINFKK------------------------------------------------------------------------------------------------- |
| 1Y9Q Chain:A ((4-181)) | TDVMFKSQIANQLKNLRKSRGLSLDATAQLTGVS-KAMLGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQNIVAYPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44696 for 471 contacts (-94.9/contact) +
2D Compatibility (PS) -7848 + (NN) -2661 + (LL) 44
1D Compatibility (HY) 400 + (ID) 650
Total energy: -55411.0 ( -117.65 by residue)
QMean score : 0.447
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