Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHKKSILECSELDEKIHQAEMNQLMDMLLSLPNYDCDIEVSFEDDYHKDKREPLFYESNLHRI-------FEF-IEAQ-DIKNGVDTFLTDEHHLAFRAYGQGYF-HKGKEGLITSLLTVKCFEEGMVPVDMSKYLLSPASDLEPSLTLEGGADA
2XC8 Chain:A ((1-121))
-----------------GIEIVNRKAVWYLTSEIKETETGIEVS-AGELHKGDEEVFPVEEVSFDLTPDDTYPVEYMLYLHMNVQTKKVSWSLCKAYLD----GEGYCDYQGNERLIMYPVSVTVFPNG---------------TREGTIFLYEKEDR
General information:
TITO was launched using:
RESULT:
Template:
2XC8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27171 for 725 contacts (-37.5/contact) +
2D Compatibility (PS) -11164 + (NN) 7279 + (LL) 3200
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -35456.0 ( -48.90 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_2XC8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XC8-query.scw
PDB file :
Tito_Scwrl_2XC8.pdb
: