Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTIPYPEVLRTYQEVASKIYGNPSSLHELGTTSSRILEASRKQIASLLELKANEIFFTSGGTEADNWVIKGLAFEK-------QHFGNHIIVSDIEHPAIKESAKWLGE-YGFEIDYAPVDD-KGFVDVEALVKLIKPETILISIMAINNEIGSIQPIKAISDLLSDK---------PTISFHIDAVQAIGKIPTKDYLTERVDFASFSSHKFHGVRGVGFLYIKEGKRISPLLT---GGGQESDLRSTTENVAGIAATAKALRMVMDKEVVAIPKISKMKTIIHDELAKYEDITLFSG----KEDFSPNIITFGIKGVR--GEVLVHAFEGHDIFISTTSACSSKAG-KPAGTLIAMGISTKLAQTAVRISLDDDNDMGQVEQFLTIFKQVYEKTKKVRG |
| 3A9Z Chain:A ((19-430)) | KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVE-DLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQ--CQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154557 for 3362 contacts (-46.0/contact) +
2D Compatibility (PS) -40505 + (NN) -22030 + (LL) 596
1D Compatibility (HY) -17600 + (ID) 5750
Total energy: -239846.0 ( -71.34 by residue)
QMean score : 0.472
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