Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYEKLLERFLTYVKINTRSNPNSTQTPTTQSQ-VDFALTVLKPEMEAIGLKDVHYLP-----------SNGYLVGTLPATSDRLCHKIGFISHMDTAD-FN-AENITPQIV-DYKGGDIELGDSGYILSPKDFPNLNNYHGQTLITTDGKTLLGADDKSGIAEIMTAMEYLASHPEIEHCEIRVGFGPDEEIGI-GADKFDVKD---F--DVDFAYTVDGGPL--GELQYETFSAAGLELTFEGR--NVHPGTAKNQMINALQLAMDFHSQLPENE-------------------------R-------------------PE----QTDGYQGFYHLYDLSGT----------VDQAKSSYIIRDFEEVNFLKRKHLAQDIADNMNEALQ-SERVKVKLYDQYYNMKKVIEKDMTPINIAKEVMEE-LDIKPIIEPIRGGT--DGSKISFM--GIPTPNLFAGGENMHGRFEFVSLQTMEKAVDVILGIVAKD |
| 3DLJ Chain:A ((24-480)) | --QDEFVQTLKEWVAIESDSVQP---VPRFRQELFRMMAV-AADTLQRLGAR-VASVDMGPQQLGQSLPIPPVILAELGSD--PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTE--------------------------VDGKLYGRGA----TDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWI--ANIDDTQYLAAKRAIRTVFGTEPDMI-RDGSTIPIAKMFQEIVH-VVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80483 for 2903 contacts (-27.7/contact) +
2D Compatibility (PS) -38472 + (NN) -14839 + (LL) 548
1D Compatibility (HY) -12800 + (ID) 2450
Total energy: -148496.0 ( -51.15 by residue)
QMean score : 0.423
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