Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEIDYKKVTGMIHSTESFGSVDGPGIRFIIFMQGCKM-----------RCQYCHNPDTWEMETNNSKERTVEDVLKEALRYKHFWGKDGG---ITVSGGEAMLQIDFITALFIEAKKLGIHTTLDTCG-FAYRATPEYHAILEKLLDVTDLVLLDLKEIDPEQHKIVTRQSNKNILQFARYLSDRGTPVWIRHVLVPGLTDIDDHLKRLGEFVQTLDNVDKFEVLPYHTMGEFKWRELGIPYPLAGVKPPTPERVKNAKDIMKTESYTEYLKRIQN |
| 4NJH Chain:A ((22-230)) | -----TYAVKEIFYTLQGEGANAGRPAVFCRF-AGCNLWSGREEDRAQAVCRFC-DTDFVGTDGENGGKFKDADALVATIAGL--WPAGEAHRFVVCTGGEPMLQLD--QPLVDALHAAGFGIAIETNGSLPVLESIDWICVSPK-------ADAPLVVTKGNELKVVIPQDNQRLADYAK-------LDFEYFLVQP--MDGPSRDLNTKLAIDWCKRHPQWRL------SMQTHKYLNIP----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17853 for 1536 contacts (-11.6/contact) +
2D Compatibility (PS) -20904 + (NN) -10975 + (LL) 4576
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -52606.0 ( -34.25 by residue)
QMean score : 0.377
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