Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKHVIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKNGGNMGASGSVSYLFDKKGVIVFAGDDADTVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKGIQALRDNGVEEFQVTELEMIPQSEVVLEGDDLETFEKLIDALESDDDVQKVYHNVADF |
| 1KON Chain:A ((4-238)) | -HSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKL-----DANPRLRAAVDKALSNNMTRDTLNRAIARG-----ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTY-DDGAIDVYTAWEEMGKVRDALEAAG-LKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29580 for 1752 contacts (-16.9/contact) +
2D Compatibility (PS) -24860 + (NN) -14975 + (LL) -92
1D Compatibility (HY) -10000 + (ID) 4300
Total energy: -83807.0 ( -47.84 by residue)
QMean score : 0.429
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