Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDKSMKLEHVAYDIRGPVLEEADRMRANGEKILRLNTGNPAAFGFEAPDEVIRDLITNARE-SEGYSDSKGIFSARKAVMQYYQL-QNIHVDMDDIYIVNGVSEGISMSMQALLDNDDEVLVPMPDYPLWTACVSLAGGNAVHYICDEEANWYPDIDDIKSKITSKTKAIVLINPNNPTGAVYPREILQEIVDIARQNDLIIFSDEVYDRLVMDGMEHIPIASIA--EDIFTVTLSGLSKSHRICGFRVGWMVLSGPRQHVKGYIEGLNMLAN-MRLCSNVLAQQVIQTSLGGQQSIDSMLLP-GGRIYEQRNYIHKAINEIPGLSAVKPNAGLYLFPKIDTDMYRIDNDEEFVLNFLKQEKVLLTHGRGFNMNTADHFRIVYLPRVDELTELQEKMARFLSQYKR |
| 1J32 Chain:A ((3-387)) | -----LAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDF---NTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGP--VPLVKAA----TKIQGHSTSNVCTFAQYGAIAAYENSQ---DCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTG---RSSLDFCSELLDQHQVATVPGAAFGA--DDCIRLSYATDLDTIKRGMERLEKFLHGIL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193056 for 3403 contacts (-56.7/contact) +
2D Compatibility (PS) -41537 + (NN) -20369 + (LL) 1156
1D Compatibility (HY) -18000 + (ID) 4850
Total energy: -276656.0 ( -81.30 by residue)
QMean score : 0.555
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