Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQKVMATLLLSTLVLSLSSPLVTLAETINPETSLTMATASTESSSEAEKQEKTQPTDSETASPSAEGSISTEKTEIGTTETSSSNESSSSSSHQSSSNEDAKTSDSASTASTPSTNTTNSSQADSKPGQSTKTELKPEPTLPLVEPKITPAPSQIESVQTNQNASVPALSFDDNLLSTPISPVTATPFYVEHWSGQDAYSHYLLSHRYGIKAEQLDGYLKSLGIQYDSNRINGAKLLQWEKDSGLDVRAIVAIAVLESSLGTQGVAKMPGANMFGYGAFDHDSSHASAYNDEEAIMLLTKNTIIKNNNSSFEIQDLKAQKLSSGQLNTVTEGGVYYTDN-SGTGKRRAQIMEDLDRWIDQHGGTPEIPAALKALSTASL-ADLPSGFSLSTAVNTASYIASTYPWGECTWYVFNRAKELGYTFDPFMGNGGDWQHKAGFETTHSPKVGYAVSFSPGQAGADGTYGHVAIVEEVKKDGSVLISESNAMGRGIVSYRTFSSAQAAQLTYVIGHK |
| 1EIY Chain:A ((6-350)) | ------------------------------------LAAIQNARDLEELKALKARYLGKKGLLTQEMKGLSALPLEERRKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALG----------------------------YQAVEGPEVESEFF----------------------------NFDALNIPEHH----------------------------------------PARDMWDTFWLTGEGFRLEGPLGEEV----EGRLLLRTHTSPMQVRYMVAHT---PPFRIVVPGRVFRFEQTDATHEAVFHQLEGL--VVGEGIAMAHLKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAVWWPEGGKWL--ELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLG--------------------------VERLAMLRYGIPDIRYFFGGRLKFLEQFKGVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 46708 for 2500 contacts (18.7/contact) +
2D Compatibility (PS) -35435 + (NN) 5598 + (LL) 11400
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: 17471.0 ( 6.99 by residue)
QMean score : 0.107
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