Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MQGRIVKSLAGFYYVESD--GVVYQTRARGNFRKKGQIPYVGDWVEFSSQDQSEGYILSIEERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEYKMIQPIIYISKLDLL--DDLVVIDDIREHYQNIGYVFCYS------QEELLPLLADKVTVFMGQTGVGKSTLLNKIAPELKLETGEISDSLGRGRHTTRAVSFYNVHKG-KIADTPGFSSLDYEVDNAEDLNESFPELRRLSHFCKFRSCTHTHEPKCAVKEALTQGQLWQVRYDNYLQFLSEIENRRETYKKVIKRK |
| 1U0L Chain:A ((9-299)) | LRRRGIVVSFHSNMVTVEDEETGERILCKLRGKFRLQNLKIYVGDRVEYTPDETGSGVIENVLHRKNLLTKPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVINKMDLYDEDDLRKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLNAINP-------------GLKLRTTTTAQLLKFDFGGYVVDTPGFANLEINDIEPEELKHYFKEFGDKQ--CFFSDCNHVDEPECGVKEAVENGEIAESRYENYVKMFYELLGRR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147952 for 2083 contacts (-71.0/contact) +
2D Compatibility (PS) -28723 + (NN) -16832 + (LL) 2032
1D Compatibility (HY) -18800 + (ID) 4600
Total energy: -214875.0 ( -103.16 by residue)
QMean score : 0.485
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