Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIENYCQDYCLETIFPKHYFKDLQVITLTAGQSVCKQGEQ--LEYLHYIVKGRFKIVRRLFNGKEHILDIKTKPTLIGDIELLTNRQIVSSVIALEDLTVIQLSLKGRKEKLLTDATFLLKLSQELAQAFHDQNIKASTNLGYTVKELLASHILAIEEQ-------GY--FQLELSSLADSFGVSYRHLLRVIHDMVKEGLIQKEKPKYFIKNRFALESLNIQP
2ZCW Chain:A ((6-198))
------------------------ETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQ-ERIYFAEAATDVRLEPLPEN-------PDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRETVTKVIGELAREGYIRSGYGKIQLLDLKGLKELAESR
General information:
TITO was launched using:
RESULT:
Template:
2ZCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90160 for 1305 contacts (-69.1/contact) +
2D Compatibility (PS) -19819 + (NN) -5762 + (LL) 2336
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -119055.0 ( -91.23 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_2ZCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZCW-query.scw
PDB file :
Tito_Scwrl_2ZCW.pdb
: