Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MAKCLTLNTHSWMEVNALKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLKPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVSLHLSWFEKGFAEEWKRLETTLLEVE-----TPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADID---GWEGNKKALKVDHIFTSEDLSISSSQVVFEGGEAP----VVSDHYGLEITMDF-- |
| 4GZ1 Chain:A ((2-256)) | NGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNE---EGYFTAILLKKGRVKFKSQEIIP------FPNTKMMR---------------------------NLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDN--VFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89525 for 1912 contacts (-46.8/contact) +
2D Compatibility (PS) -25591 + (NN) -6135 + (LL) 2736
1D Compatibility (HY) -6800 + (ID) 2050
Total energy: -127365.0 ( -66.61 by residue)
QMean score : 0.325
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