Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MNLNDRLK-IEEMEEKYDSFKPRINALVEAIDDFQKHYEDYVKLREFYGSEDWFRLSEQTENNLKCGVLSEDQLFDFIGEHNELVGQFLDMSSQMYRHL-----------
3UUN Chain:A ((338-453))
EVNLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVG--NILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ
General information:
TITO was launched using:
RESULT:
Template:
3UUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5869 for 547 contacts (-10.7/contact) +
2D Compatibility (PS) -10454 + (NN) -5784 + (LL) 288
1D Compatibility (HY) 400 + (ID) 800
Total energy: -22219.0 ( -40.62 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_3UUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UUN-query.scw
PDB file :
Tito_Scwrl_3UUN.pdb
: