Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------MKLSLFIIAVLMPVILLSACSDHAEEHA-----------------SINTKKTVENITDVRKTAKTSIDWTKPSGGEYPDIK-QKHVWIDVNVKEQKAYIKEGSNTIYTMMISSGLDQTKDDATPKGTFYVEPERGEWFFSE----GYQEGAEYWVSWKNHGEFLFHSVPMTKDQKVIKTEAEKLGTKASHGCIRLTIPDAKWVYENIPEHTKVVIS
1ZAT Chain:A ((1-250))KEQLASMNAIANVKATYSINGETFQIPSSDIMSWLTYNDGKVDLDTEQVRQYVTDLGTKYNTSTNDTKFKSTKRGEVTVPVGTYSWTIQTDSETEALKKAILAGQDFTRSPIVQGGTTADHPLIEDTYIEVDLENQHMWYYKDGKVALETDIVSG---KPTTPTPAGVFYVWNKEEDATLKGTNGTPYESPVNYWMPIDWTGVGIHDSDWQPEYGG------DLWKTRGSHGCINTPPSVMKELFGMVEKGTPVLVF


General information:
TITO was launched using:
RESULT:

Template: 1ZAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 836 -63439 -75.88 -342.91
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -75.88
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.349

(partial model without unconserved sides chains):
PDB file : Tito_1ZAT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZAT-query.scw
PDB file : Tito_Scwrl_1ZAT.pdb: