Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASNRYHSINEIMESQLFYQITTPPKKTQKAQYDPEVEKFLEIIEFVKENGREPQKVPTDLTERSLASRLIGIRKDPDRMEYLKEYDEIGLLEVRSKELTIPKISSIDDILKSGLSALLGDNLNNDITRSIFDTSSLQKV-TTMPEYVAKRKKIKDFGKFEELFKKCHKEITEGKRKILTFKNEQDIQSNSFYILKGVLLYVEDVGERKKAKGKTNARLRCIFENGTESDMLLRSLSAELYKHGRRVTDNEDTLLDNVREDDVSTGFIYVLKSLSTDPQISSIKNLYKIGFTTGSVENRIRNAENQSTYLYAPVEIVTTYQVFNMNASKFETAIHHALANNNLDVSILGANGKMLVPKEWFVVTLEDLQAVIDEIVMMVHLYD
3L2O Chain:B ((55-383))AAS----------------TLTRLPIDVQLYILSFL--SPHDLCQLGSTNHYWNETVRDPILWRYFLLRD------------LPSWSSVDWKSLPDLEILKKPISEVFFDYMAVYRMCCPYLIIQNEPRFAMFGPGLEELNTSLVLSLMSSEELCPTAGLPQ-----RQIDGIGSGVNFQLNNQ-----HKFNILI-----LYSTTRRYSVI----PQIQKVCEV--------------------------------------VDGFIYVANAEAHKR--------HEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLNHPWLVQDTEAE------------TLTGFLNGIEWILEEVES--


General information:
TITO was launched using:
RESULT:

Template: 3L2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1182 -127477 -107.85 -466.95
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -107.85
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.309

(partial model without unconserved sides chains):
PDB file : Tito_3L2O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L2O-query.scw
PDB file : Tito_Scwrl_3L2O.pdb: