Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKNILLVGMLVLLLMFVSACSGTASKGSSSDSASEKTEMRTYKSPKGNVNIPAHPKRIVTDF--YAGELLSVGANVVGSGS-WSF--DNPFLKSKLKNVKDVGD--PISVEKVMELQPDLIVVMNE---ENVDKLKKIAPTVVIPYNTAKNVEDTVSMFGDIAGAKDQAKSFMADFNKKAEAAKKKIAGVIDKDATFGIYENTDKGEFWVFNDNGGRGGQAVYNALGLKAPEKIEQDVIKKGEMKQLSQEVIPEYAADYMFITDYNPKG---ESKTLDKLENSSIWKNLDAVKHNRVFINDFDSFYP-YDPISVSKQVDIITDMLIKRAEENKK 3TNY Chain:A ((17-296)) --------------------------------------EVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSET-LRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKV-NQ-EISMVRFMP-GDVRIYHGDT-FSGV-ILKELGFKRPGDQNKD---DFAERNVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVIAANLLLDDIEKRFV--------

General information: TITO was launched using: RESULT: Template: 3TNY.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1399 73739 52.71 277.21 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain A : 0.73 3D Compatibility (PKB) : 52.71 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.73 QMean score : 0.555

(partial model without unconserved sides chains): PDB file : Tito_3TNY.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3TNY-query.scw PDB file : Tito_Scwrl_3TNY.pdb: