Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MT-------NDKMLARIAALLRQAEGTDNPHEADAFMSTAQRLATAASIDLAVARS-------------HAGNRSPAQAPTQRTI------TIGAAGTRGLRTYVQ-----LFVLIAAANDVRCDVASNSTFVYAYGF----AEDIDTSHALYASLVVQMVRASDAYL------ASGAHRPTPTITARLN------FQLAFGARVGQRLADAREQTRQEATKDRDRPPG------------------TAIALRDK-------DIELHEYYRRSSKARGAWRASRATAGY----------SSAARRAGDRAGRQARLGNNPELPGARAALGR------------------- |
| 1W5C Chain:D ((1-350)) | MTIAIGRAPAERGWFDILDDWLKRDRFVFVGWSGILLFPCAYLALGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGAFGLIGFMLRQFEIARLVGVRPYNAIAFSAPIAVFVSVFLIYPLGQSSWFFAPSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMAPQDQPHENFVFPEEVLPRGN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 286 for 1469 contacts (0.2/contact) +
2D Compatibility (PS) -26553 + (NN) -7514 + (LL) 0
1D Compatibility (HY) -10400 + (ID) 1750
Total energy: -45931.0 ( -31.27 by residue)
QMean score : 0.187
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