Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDDERFSLLVGLTGASD-----LWPVRDERIPQGVPMCAGYVP-------------GIPRLGVPALLMSDAGLGVTNPGYRPGDTATALPAGLALAASFNPVLARSSGKAIGREARSRGFNVQLAGAINLARDPRNGRNFEYLSEDPLLSATMAAESIIGIQQQ------GVIATTKHFSLNCN-ETNRHWLDAVIDPDAHRESDLLAFEIVIERSQPGAVMAAYNKVNGDYAAGNDHLLNDVLKGAWG-YRGWVMSDWGGTPS-----------W--ECALAGLDQEC-GAQIDAVLWQSEAFTDRLRAAYADGNLPKGRLSDMVRRILRSMFAVGIDRWKPA---------PAPDMNAHNEIAAQMARQGIVLLQNR-GLLPLAPESAGRIAVIGGYAHLGV-PAGYGSSAVTPPGG-Y--AGVIPIGGSGLAAGLRNLYLLPSSPLSEL---RKRLPN-AQFEFDPG---INPAEAVLAARRADIAIVFAIR---AEGEGFDSADLSLPWGQDALIAAVASANANTVVVLETGNPVTMPWR-DSVNAIMQAWYPGQAGGQAVAEIVTGQVNPSGRLPITFPVDLGQTPRSQPPELGAPWGTSTTIHYTEGAD---VGYRWFASTNQTPMFAFGHGLSYTSFEYRDLVVTGGH----TV-HASFSVTNTGDRSGADVPQLYMIAAP-G-ESR-LRLLGFERVELEPGQTRRVRIEADPRLLARYDGEARSWRIEPGGYTVAVGASAVALKLAAKVKLAGRGFGR |
| 3U48 Chain:A ((14-731)) | MTLDEKIGQLNLPGAGDITTGQASSSGIAQKIKEGKVGGLFNIKSVTKIKEVQRIAVEESRLKIPLLFGMDVIHGY----------ETAFPIPLGLSCTWDMELIEKSARIAAIEASADGICWTFSPMVDISRDPRWGRVSEGSGEDPYLGAQIAKAMVKGYQGKDFSDNTSIMACVKHFALYGAGEAGRDYNTVDMSRVRMYNEYFPPYKAAVD-AGVGSVMTSFNEIDGIPATGNKWLMTDVLRKRIGAFKGFVVTDYTAINEMIDHGMGDLQTVSALALRAGVDMDMVGEG----------FLTTLKKSLQEGKITQAQIDAACKRILEAKYKLGLF-SDPYKYCNEERARTQIFTPEHRKIAREIAAQSFVLLKNDNNVLPLKKS--GTIALVGPLADNRVNMPGTWSVAAKHAESVSLLEGLKKAAGNDA----RILYAHGSNLDEDKSLIERATMFGKTLKYDPRPKDVVIKEAVDIANQADVIVAALGESAEMSGEASSRSNIEIPALQRELLQALLKTGKPVVLVLFTGRPLALTWEHENVPAILNVWFAGTEAGDAISDALFGVVNPSGKLSATFPRNVGQVPIYYNH----K---NTGRPLPEGQWFQKFRSNYLDV-PNDPLYPFGYGLSFTKFTYGDLKLSSTNLKGNQTLTASIELTNSGDYDGAEVVQLYIRDLVGSTTRPVKELKGFQKVFLKKGETKTITFKITPEDLKFYNYD-LKYDWEPGEFVIMVGGNSRDLKSQ------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -277165 for 5758 contacts (-48.1/contact) +
2D Compatibility (PS) -69174 + (NN) -31326 + (LL) 2344
1D Compatibility (HY) -31200 + (ID) 9200
Total energy: -415721.0 ( -72.20 by residue)
QMean score : 0.449
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