Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPTGTSATTTRPWTPRIATQLSVLACAAFIYVTAEILPVGALSAIA-RNLRVSVVLVGTLLSWYALVAAVTTVPLVRWTA----HWPR-RRALVVSLVCLTVSQLVSALAP------NFAVLAAGRVLCAVTHGLLWAVIAPIATRLVP-PSHAGRATTSIYIGTSLALVVGSPLTAAMSLMW-------GWRLAAVCVTGAAAAVALAARLALPEMVLRADQL--EHV----GR-RARHHRNPRLVKVSVLTMIAVTGHFVSYTYIVVIIRDVVGVRGPNLAWLLAAYGVAGLVSVPLVARPLDRWPKGAVIVGMTGL-TAAFTLLTALAFGERHTAATALLGTGAIVLWGALATAVSPMLQSAAMRSGG--------DDPDGASGLYVTAFQIGIMAGALLGGLLYERSLAMMLTASAGLMGVALFGMTVSQHLFENPTLSPGDG |
| 4M64 Chain:A ((9-394)) | -----------------------LSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLTNSLVLFLLFSAHLFEGTAQVVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPFPRFFASLAGFVTAGITLPFVSYVGGADRGFGFQMFTLVLIAFFIASTIVTLRNVHEVYSSDNGVTAGRPHLTLKTIVGLIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLLTLIVFPRLVKMLSRRILWAGASVMPVLSCAGLFAMALADIHNAA---LIVAAGIFLNIGTALFWVLQVIMVADTVDYGEFKLNIRCESIAYSVQTMVVKGGSAFAAFFIALVLGLI------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M64.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240831 for 2510 contacts (-95.9/contact) +
2D Compatibility (PS) -35498 + (NN) -7440 + (LL) 4012
1D Compatibility (HY) -22400 + (ID) 2300
Total energy: -304457.0 ( -121.30 by residue)
QMean score : 0.110
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