Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHGMVLGKFMPPHAGHVYLCEFARRW--VDELTIVVGSTAAE-----PIPGAQRVAWMRELFPFDRVVHLANENPQ--RPWEHPDFWDIWKASLQGVLATRPD-FVFGAEPYNADFAQVLG-------ARFVAVDHG--------------RTVVPVTATDIRADPL--GHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR |
| 2H29 Chain:A ((2-187)) | KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTY----DTIKAFKEQHK-DSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLY--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H29.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91690 for 1148 contacts (-79.9/contact) +
2D Compatibility (PS) -15949 + (NN) -1684 + (LL) 11996
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -104227.0 ( -90.79 by residue)
QMean score : 0.328
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