Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRLRAAEHPRPDYVLLHISDTHLIGGDRRL-------YGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP---AAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAP---------SMAPLDRVCM-IDGLRIIVLDTSVPG------------------------------------------HHHGEIRASQLGWLAEELATPA--PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGT-DVRAILAGHLHYSTNATF-VGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSVIPLGGGETVGTFVSPGQARRKIAESGIFIEPSRRDSLFKHPPMVLTSSAPRSPVD |
| 2NXF Chain:A ((3-313)) | ----------DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWR--RERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA-CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPI--CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETP------------PHSHAFATAYLYEDRMVMKGRGR---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154319 for 2099 contacts (-73.5/contact) +
2D Compatibility (PS) -26580 + (NN) -17303 + (LL) 3556
1D Compatibility (HY) -3600 + (ID) 2500
Total energy: -200746.0 ( -95.64 by residue)
QMean score : 0.497
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