Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAINLELPRKLQAIIVKTHQGAAEMMRPIARKYDLKEHAYPVELDTLINLFEGAAESFNFAGAHSLRDEDEGKDENHNGANMA---AVVQTMEASWGDVAMMLSLPYQGLGNAAISAVATDEQLER-LGK-----VWAAMAITEPEFGSDSAAVSTTATLDGDEYVINGEKIFVTAGSRATHIVVWATLDKSLGRPAIKSF---IVPREHPGVTVERLEHKLGIKGSDTAVIRFDNARIPKGNLLGNPEIEVGKGFAGVMETFDNTRPIVAAMAVGIGRAALEEIRSVLTGAGVEISYDKPSHTQSAAAAEFLRMEADWEASYLLSLRAAWQADNNIPNSKEASMSKAKAGRMASDVTCKTVELAGTTGYSEQSLLEKWARDSKILDIFEGTQQIQQLVVARRLLGLSSSELK |
| 1T9G Chain:C ((10-388)) | LGFSFEFTEQQKEFQATARKFAREEIIPVAAEYD-KTGEYPVPLIR-------RAWELGLMNTHI--------PENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVL----IGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKY---ALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93534 for 3172 contacts (-29.5/contact) +
2D Compatibility (PS) -40208 + (NN) -17837 + (LL) 1424
1D Compatibility (HY) -19200 + (ID) 6350
Total energy: -175705.0 ( -55.39 by residue)
QMean score : 0.405
|
|
|