Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MFESLNKVINGYGL-ISGFAIIGVTMAVSYWLSARLTRGRLHGSAIAIFLGLVLSYVGGVATGGQKGLVDVPLMSG------IGLLGGAMLRDFAIVATAFGVNVEELRRAGVSGVVSLFLGVGSSFVAGVAVAM------AFGYTDAVSLTTIGAGA---------VTYIVGPVTGAALGASS-EVMALSIAAGLVKAILVMVLTPFVAPYIGLNNPRTAVIFGGLMGTSSGVAGGLAATDPKLVPYGCLTAAFYTAIGCLLGPSLLYFSVRGLVG-- |
| 2IWV Chain:A ((5-281)) | NDWHFNIGAMYEIENV--EGYGEDMDG------LAEPSVYFNAAN--GPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEP-GKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120216 for 1573 contacts (-76.4/contact) +
2D Compatibility (PS) -25726 + (NN) 1888 + (LL) 1384
1D Compatibility (HY) 6400 + (ID) 2200
Total energy: -138470.0 ( -88.03 by residue)
QMean score : -0.122
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