Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLQIRGYAAQSASTPLTAHRFERRAPRADDLVIDILYCGVCHSDLHQARNEWHNSLYPLVP---GHEIIGRVASVGEAVSGFAVGELVGVGCMVDSCRHCAACSEGLEQYCA--EYPTLTYNGRDRHDGLPTFGGYSERIVVSARFVLRIPQGLDPKA---AAPLLCAGITSYSPLRH--WKVGPGSRVAVVGLGGLGHMGLKFARALG-AEVALFTRSPGKEEEARRLGADQVILS-TDP--QRMAAVAGR-FDLILDTVPHQH--DLNPYLATLKRDGTLVLVGLLEPLE-PAVHGAQLVMGRRSIAGSAIGGIAETQEMLDFCAAHGIACDIEMIEIQQINQAYERMLASDVKYRFVIDMASLQKSF |
| 1H2B Chain:B ((43-357)) | ------------------------------DVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGT-CLACRAGEDMHCENLEFP-----------GLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYL--LGRMGRLIIVGYGGELRFPTI---RVISSEVSFEGSLVGNYVELHELVTLALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1H2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -236447 for 2536 contacts (-93.2/contact) +
2D Compatibility (PS) -31638 + (NN) -4780 + (LL) 3492
1D Compatibility (HY) -20800 + (ID) 5200
Total energy: -295373.0 ( -116.47 by residue)
QMean score : 0.461
|
|
|