Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYDSIFRPGLFDGQTIIVTGGGSGIGRCTAHELAALGAHVVLVGRKAEKLEKTAGEIVEDGGSVSWHACDIREEEAVKTLVANILAERGTIHHLVNNAGGQYP-SPLASISQKGFETVLRTNLVGGFLVAREVFNQSMSKTGGSIVNMLADMWG--GMPGMGHSGAARSGMENFTRTAAVEWGHAGVRVNAVAPGWI-------------ASSGMDTYEGAFKAVIPTLREHVPLKRIGSESEVAAAIVFLLSPGAAFVSGNTIRIDGAASQGSRAFPLFKGKPGQSRAYNGFHRAYLPDVLKDQED |
1ZEM Chain:B ((5-261)) | -----------FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNT-ASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139749 for 2064 contacts (-67.7/contact) +
2D Compatibility (PS) -26207 + (NN) -8919 + (LL) 2164
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -192811.0 ( -93.42 by residue)
QMean score : 0.573
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