Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPHLIYYVATSLDGFIARPDGSVDWLDRFAEGGNDHGYNGFYQGIDGLLMGRGTYDIVRG-F-GDWP----------------Y---------PGKPCQVLTRNPRESA------VEGVELR-----HDTPQEGLARLGEQGCRRVWLAGGGSLAGSCLAAGLLDEVIVSVIPQLLGAGI--PLFAGG------RERRLQLLEQHGYNSGIVQMRYQVIAEDDPQ
2B3Z Chain:A ((156-371))
GLPYVTLKAAASLDGKIATSTGDSKWITSEA---ARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEEGIMSVYVEGGSAVHGSFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGR-DIKLTAKPT------
General information:
TITO was launched using:
RESULT:
Template:
2B3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101714 for 1159 contacts (-87.8/contact) +
2D Compatibility (PS) -17870 + (NN) -1061 + (LL) -336
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -131331.0 ( -113.31 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_2B3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B3Z-query.scw
PDB file :
Tito_Scwrl_2B3Z.pdb
: