Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVNASIFWYDYETTGIDPRR---DRPLQIAGIRTDEALNEIG--EPMNLYCRPSDDILPHPMACLITGITPQRLAERGLSEADFMTRVHAQLAQ-----PATCVAGYNSLRFDDEV-TRYSLYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWPQLDGRLSLKLEMLTAANGLEH-GQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVRLLQPLVHVSGRFSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGELPVPLKQIQVNRCPVVAPLSVLRAEDRQRTGIELDECQQKAELLRQHQTVWADKLTALYGEESFSASDDPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQELFFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPAVLAAWRDYAAELRQRYSLET |
| 3CG7 Chain:A ((18-209)) | ---FDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSI-DTADTFDVVYEQFQQWLITLGLEEGKFAFVCDS--RQDLWRIAQYQMKLSNIQMP-------AFFRQYINLYKIFTNEMDRM-GPK--ELSATTNIGKMNEYYDLPTIGRAHDAMDDCLNIATILQRMINMG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57867 for 1339 contacts (-43.2/contact) +
2D Compatibility (PS) -19861 + (NN) -13708 + (LL) 23636
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -73500.0 ( -54.89 by residue)
QMean score : 0.313
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