Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLRSVIAADHPALFALWSRTPGIRLRAEDAYPFFLAY-LQRNPGLSLLVETEGEVIACLMAGHD---GRRGYLQHLVVDPGYRGLGLARRMLDEVLARLAREGIGKSHVFVLDAAEEAQAFWRAQSDWERRKDIQVFSTREGHA
1MK4 Chain:A ((1-129))MDIRTITSSDYEMVTSVLNEWWGGRQ-L--K-EKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKL-GFDIEKG-----------


General information:
TITO was launched using:
RESULT:

Template: 1MK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88780 for 842 contacts (-105.4/contact) +
2D Compatibility (PS) -13901 + (NN) -8806 + (LL) 1084
1D Compatibility (HY) -6800 + (ID) 750
Total energy: -117953.0 ( -140.09 by residue)
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_1MK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MK4-query.scw
PDB file : Tito_Scwrl_1MK4.pdb: