Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
1MNK Chain:B ((1-151))
-GLSDGEWQLVLNVWGKVEADVAGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKVGNTTLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDMAAKYKELGF--
General information:
TITO was launched using:
RESULT:
Template:
1MNK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67013 for 1099 contacts (-61.0/contact) +
2D Compatibility (PS) -16332 + (NN) -10458 + (LL) 156
1D Compatibility (HY) -17200 + (ID) 6950
Total energy: -117797.0 ( -107.19 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_1MNK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MNK-query.scw
PDB file :
Tito_Scwrl_1MNK.pdb
: