Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWENENKIYCKQTLIEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
3CWK Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKVSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELIETMTADDVVCTKVFVRE
General information:
TITO was launched using:
RESULT:
Template:
3CWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45208 for 983 contacts (-46.0/contact) +
2D Compatibility (PS) -15158 + (NN) -6897 + (LL) 208
1D Compatibility (HY) -16000 + (ID) 4900
Total energy: -87955.0 ( -89.48 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_3CWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CWK-query.scw
PDB file :
Tito_Scwrl_3CWK.pdb
: