Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVMKNYLLPILVLFLAYYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLIDTETAMKEISGIINAQASPKEECALEIIKGTALRKSEVYYDKSPLTPILLGNPGRKIMEFFSLRYYNKDMFVSN
3D5Q Chain:D ((4-261))-----------------------NEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS----MQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYS-----------


General information:
TITO was launched using:
RESULT:

Template: 3D5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180572 for 2139 contacts (-84.4/contact) +
2D Compatibility (PS) -27221 + (NN) -8773 + (LL) 3404
1D Compatibility (HY) -35600 + (ID) 10250
Total energy: -259012.0 ( -121.09 by residue)
QMean score : 0.428

(partial model without unconserved sides chains):
PDB file : Tito_3D5Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D5Q-query.scw
PDB file : Tito_Scwrl_3D5Q.pdb: